BplI
5'...↓ 8(N) G A G (N)5 C T C (N)13↓...3'
3'...↓13(N) C T C (N)5 G A G (N)8 ↓...5'
3'...↓13(N) C T C (N)5 G A G (N)8 ↓...5'
Detailní popis
Thermo Scientific conventional restriction endonucleases are a large collection of high quality restriction enzymes, optimized to work in one of the buffers of the Five Buffer System. In addition, the universal Tango buffer is provided for convenience in double digestions. All of the enzymes exhibit 100% activity in the recommended buffer and reaction conditions. To ensure consistent performance, Thermo Scientific restriction enzyme reaction buffers contain premixed BSA, which enhances the stability of many enzymes and binds contaminants that may be present in DNA preparations.
Highlights
- Superior quality – stringent quality control and industry leading manufacturing process
- Convenient color-coded Five Buffer System
- Includes universal Tango buffer for double-digestions
- BSA premixed in reaction buffers
- Wide selection of restriction endonuclease specificities
Applications
- Molecular cloning
- Restriction site mapping
- Genotyping
- Southern Blot
- Restriction fragment length polymorphism (RFLP)
- SNP
Note
BplI requires only Mg2+ for its activity, but is stimulated by S-adenosylmethionine. 0.05 mM S-adenosylmethionine gives more than a 100-fold increase in BplI activity. Still, complete cleavage of some substrates with BplI is difficult to achieve. BplI concentration is determined by the maximum cleavage level achieved when no change in the fragmentation pattern is observed with further enzyme increase.
For methylation sensitivity refer to product specifications.
Conditions for 100% Activity |
|
Digestion of Agarose-embedded DNA | Minimum 10 units of the enzyme are required for complete digestion of 1 µg of agarose-embedded lambda DNA in 16 hours. |
Double Digestion | Perform double digestion using DoubleDigest. |
Hazardous | No |
Isoschizomers | Search for commercial isoschizomers using REsearch. |
Storage Buffer | BplI is supplied in: 10 mM Tris-HCl (pH 7.4 at 25°C), 100 mM KCl, 1 mM DTT, 1 mM EDTA, 0.2 mg/mL BSA, and 50% (v/v) glycerol. |
Storage Condition | -20 C |
Reaction conditions
Recommended buffer for 100% activity | Optimal temperature | Enzyme activity in Thermo Scientific buffers, % | Tango buffer for double digestion | |||||
---|---|---|---|---|---|---|---|---|
B (blue) 1X |
G (green) 1X |
O (orange) 1X |
R (red) 1X |
Tango (yellow) 1X / 2X |
||||
Tango | 37°C | 0-20 (+SAM) | 20-50 (+SAM) | 0-20 (+SAM) | 0-20 (+SAM) | 100 (+SAM) | 20-50 (+SAM) | 1X (+SAM) |
Methylation Effects
- Dam: never overlaps - no effect.
- Dcm: never overlaps - no effect.
- CpG: may overlap - no effect.
- EcoKI: may overlap - no effect.
- EcoKI: never overlaps - no effect.
Methylation type | Sequence | Cleavage effect |
---|---|---|
CpG | 5'...m5C GAG(N)5CTm5C G ...3'3'... Gm5CTC(N)5GA Gm5C ...5' |
No effect |
Number of recognition sites in DNA molecules
Lambda | ΦX174 | M13mp18/19 | pBR322 | puc18/19 | pUC57 |
---|---|---|---|---|---|
1 | 0 | 0 | 0 | 0 | 0 |
pTZ19R/U | pTZ57R | pBluescriptIIKS(±) | pBluescriptIISK(±) | pACYC177 | pACYC184 |
0 | 0 | 0 | 0 | 0 | 0 |
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