BoxI (PshAI)
Detailní popis
Thermo Scientific conventional restriction endonucleases are a large collection of high quality restriction enzymes, optimized to work in one of the buffers of the Five Buffer System. In addition, the universal Tango buffer is provided for convenience in double digestions. All of the enzymes exhibit 100% activity in the recommended buffer and reaction conditions. To ensure consistent performance, Thermo Scientific restriction enzyme reaction buffers contain premixed BSA, which enhances the stability of many enzymes and binds contaminants that may be present in DNA preparations.
Highlights
- Superior quality – stringent quality control and industry leading manufacturing process
- Convenient color-coded Five Buffer System
- Includes universal Tango buffer for double-digestions
- BSA premixed in reaction buffers
- Wide selection of restriction endonuclease specificities
Applications
- Molecular cloning
- Restriction site mapping
- Genotyping
- Southern Blot
- Restriction fragment length polymorphism (RFLP)
- SNP
Note
For methylation sensitivity refer to product specifications.
Conditions for 100% Activity |
|
Digestion of Agarose-embedded DNA | Minimum 10 units of the enzyme are required for complete digestion of 1 µg of agarose-embedded lambda DNA in 16 hours. |
Double Digestion | Perform double digestion using DoubleDigest. |
Hazardous | No |
Isoschizomers | Search for commercial isoschizomers using REsearch. |
Note | Incubation at 30°C results in a 2.5-fold increase in activity. |
Storage Buffer | BoxI is supplied in: 10 mM potassium phosphate (pH 7.4 at 25°C), 100 mM NaCl, 1 mM EDTA, 1 mM DTT, 0.15% Triton X-100, 0.2 mg/mL BSA, and 50% (v/v) glycerol. |
Storage Condition | -20 C |
Reaction conditions
Recommended buffer for 100% activity | Optimal temperature | Enzyme activity in Thermo Scientific buffers, % | Tango buffer for double digestion | |||||
---|---|---|---|---|---|---|---|---|
B (blue) 1X |
G (green) 1X |
O (orange) 1X |
R (red) 1X |
Tango (yellow) 1X / 2X |
||||
Tango | 37°C | 0-20 | 0-20 | 0-20 | 20-50 | 100 | 20-50 | 1X or 2X |
Incubation at 30°C results in a 2.5-fold increase in activity.
Methylation Effects
- Dam: never overlaps - no effect.
- Dcm: never overlaps - no effect.
- CpG: may overlap - cleavage impaired.
- EcoKI: never overlaps - no effect.
- EcoBI: may overlap - effect not determined.
Methylation type | Sequence | Cleavage effect |
---|---|---|
CpG | 5'...GAm5C G(N)3GTC ...3'3'... CT Gm5C(N)3CAG ...5' |
Impaired |
CpG | 5'...GAm5C GNNm5C GTC ...3'3'... CT Gm5CNN Gm5CAG ...5' |
Blocked |
CpG | 5'...GAC(N)4GTm5C G ...3'3'... CTG(N)4CA Gm5C ...5' |
No effect |
Cleavage efficiency close to the termini of PCR fragments
bp from the recognition site to fragment end | ||||
---|---|---|---|---|
1 | 2 | 3 | 4 | 5 |
0 | 50-100 |
Number of recognition sites in DNA molecules
Lambda | ΦX174 | M13mp18/19 | pBR322 | puc18/19 | pUC57 |
---|---|---|---|---|---|
7 | 1 | 0 | 1 | 0 | 0 |
pTZ19R/U | pTZ57R | pBluescriptIIKS(±) | pBluescriptIISK(±) | pACYC177 | pACYC184 |
0 | 0 | 0 | 0 | 0 | 2 |
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